PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008224428.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 238aa    MW: 27722.2 Da    PI: 10.1383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008224428.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.5e-0782128455
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +h  +Er RR++ ++++  L ++lP+ a      K +K  i++++   I++Lq
  XP_008224428.1  82 SHMLNERMRREKQKQGYMALHSMLPTgA------KSDKNWIVQMTAMNIQQLQ 128
                     58889*********************66......899999*****99999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-1077142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.54478127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.77E-482129No hitNo description
Gene3DG3DSA:4.10.280.106.0E-782142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.0E-582128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MNMDQYILEA LEGEFLLYES LPVLNQRAFV PYTSRPITEK GLDKPPNSMN MNKRMVQFLR  60
KIWAPATARI VTGEDCRERG FSHMLNERMR REKQKQGYMA LHSMLPTGAK SDKNWIVQMT  120
AMNIQQLQRY KEELRKRNME VEAILVANEK ERVNWSKIRL RVANPTSGVD SMLEVLRCLQ  180
YLGLKARNVQ SNFSAQEFSA ELEIETKVSL SLSLSLSHTK VLQLFFFWFF SANASKPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008224428.11e-178PREDICTED: transcription factor bHLH92
TrEMBLM5XRD41e-149M5XRD4_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.17e-39bHLH family protein